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References

    1. Brendel, V., Xing, L. and Zhu, W.
    Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus.
    Bioinformatics 20(7), 1157-1169 (2004).

    2. Kleffe, J., Hermann, K., Vahrson, W., Wittig, B. and Brendel, V.
    Logitlinear models for the prediction of splice sites in plant pre-mRNA sequences.
    Nucl. Acids Res. 24(23), 4709-4718 (1996)

    3. Brendel, V., Kleffe, J., Carle-Urioste, J.C. and Walbot, V.
    Prediction of splice sites in plant pre-mRNA from sequence properties.
    J. Mol. Biol. 276(1), 85-104 (1998)

    4. Brendel, V. and Kleffe, J.
    Prediction of locally optimal splice sites in plant pre-mRNA with applications to gene identification in Arabidopsis thaliana genomic DNA.
    Nucl. Acids Res. 26(20), 4748-4757 (1998)

    5. Usuka, J., Zhu, W. and Brendel, V.
    Optimal spliced alignment of homologous cDNA to a genomic DNA template.
    Bioinformatics 16(3), 203-211.

    6. Usuka, J. and Brendel, V.
    Optimal spliced alignment of homologous proteins to a genomic DNA template.
    J. Mol. Biol. 297(5), 1075-1085 (2000)

 
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