PaCE     - Parallel Clustering of ESTs

PaCE is recently developed software to cluster EST sequences on parallel or cluster computers. The algorithm is described in

Kalyanaraman, A., Aluru, S., Kothari, S. & Brendel, V. (2003) Efficient clustering of large EST data sets on parallel computers. Nucl. Acids Res. 31, 2963-2974.

and

Kalyanaraman, A., Aluru, S., Brendel, V. & Kothari, S. (2003) Space and time efficient parallel algorithms and software for EST clustering. IEEE Trans. Parall. Distrib. Syst. 14, 1209-1221.

Correspondence should be addressed to Srinivas Aluru.

For code availability, please contact Anantharaman Kalyanaraman.

Applications of the code to plant EST collections are described at PlantGDB.